Bioinformatics Group

Institute of Molecular Biology NAS RA

Software

TMM

Software for assessment of activity of telomere maintenance mechanisms from gene expression data.

Cytoscape app-store              Source code              Citation              Project page

Computel

Software for computation of mean telomere length from Whole Genome Next Generation sequencing data.
Source code and documentation              Citation

PSFC

A Cytoscape app for pathway signal flow calculation based on gene expression data, pathway topology and user-defined rules.
Cytoscape app-store              Source code and documentation              Citation

CyKEGGParser

A Cytoscape app for parsing and automatic corrections of KEGG pathways, and obtaining tissue-specific and protein-protein interaction based pathways.
Source code and documentation               Citation

KEGGParser

A Matlab based tool for parsing and editing KEGG pathway graphs.
Tool and documentation                            Citation